Toolbox Fast Marching: toolbox_fast_marching.m - File Exchange

Toolbox Fast Marching - A too...

callback_active_contour(x, op... callback_active_contour - callback for conjugate gradient

check_face_vertex(vertex,face... check_face_vertex - check that vertices and faces have the correct size

clamp(x,a,b)

compute_alpha_map(aname, opti... compute_alpha_map - set up alphamap

compute_bending_invariant(ver... compute_bending_invariant - compute bending invariants

compute_cuvilinear_abscice(c) compute_cuvilinear_abscice - compute the curvilinear abscice of a curve

compute_distance_landmark(sta... compute_distance_landmark - compute an heuristic using landmark points

compute_distance_to_points(X,... compute_distance_to_points - compute euclidean distance to a set of points.

compute_eccentricity_transfor... compute_eccentricity_transform - compute the eccentricity of a binary shape

compute_edge_energy(M,s,epsi,... compute_edge_energy - compute an energy for fast marching.

compute_edge_face_ring(face) compute_edge_face_ring - compute faces adjacent to each edge

compute_edges(face) compute_edges - from a list of faces, compute the list of (unique) edges.

compute_gaussian_filter(n,s,N... compute_gaussian_filter - compute a 1D or 2D Gaussian filter.

compute_geodesic(D, x, option... compute_geodesic - extract a discrete geodesic in 2D and 3D

compute_geodesic_mesh(D, vert... compute_geodesic_mesh - extract a discrete geodesic on a mesh

compute_grad(M,options) compute_grad - compute the gradient of an image using central differences

compute_heuristic_landmark(DL... compute_heuristic_landmark - compute an heuristic using landmark points

compute_heuristic_multiresolu... % compute coarse resolution map

compute_levelset_shape(name, ... compute_levelset_shape - compute some basic level set shapes

compute_saddle_points(Q,D,mas... compute_saddle_points - compute saddle points of a Voronoi segmentation

compute_shape_boundary(M) compute_shape_boundary - extract boundary points

compute_vertex_ring(face) compute_vertex_ring - compute the 1 ring of each vertex in a triangulation.

compute_voronoi_triangulation... compute_voronoi_triangulation - compute a triangulation

compute_voronoi_triangulation... compute_voronoi_triangulation_mesh - compute a triangulation

convert_distance_color(D,M) convert_distance_color - convert a distance function to a color image

crop(M,n,c) crop - crop an image to reduce its size

display_eccentricity(E, mode) display_eccentricity - display the transform

display_segmentation(B,M) display_segmentation - display a level set segmentation

divgrad(M,options) divgrad - compute either gradient or divergence.

eucdist2(varargin) EUCDIST2 Compute 2-D Euclidean distance transform.

generate_constrained_map(M,nb... generate_constrained_map - generate a constraint map from a 2D map.

getoptions(options, name, v, ... getoptions - retrieve options parameter

image_resize(img,p1,q1,r1) image_resize - resize an image using bicubic interpolation

imageplot(M,str, a,b,c) imageplot - diplay an image and a title

load_image(type, n, options) load_image - load benchmark images.

load_potential_map(name, n, o... load_potential_map - prepare a potential map for FM computations

mmax(A) mmax - maximum entry from a matrix.

nb_dims(x) nb_dims - debugged version of ndims.

num2string_fixeddigit(num, d) num2string_fixeddigit - convert a number to string with a fixed number of digits

perform_active_contour(D0, mo... perform_active_contour - perform active contour resolution

perform_blurring(M, sigma, op... perform_blurring - gaussian blurs an image

perform_circular_fast_marchin... perform_circular_fast_marching_2d - launch the Fast Marching algorithm for circular propagation.

perform_conjugate_gradient(A,... perform_conjugate_gradient - perform conjugate gradient

perform_contour_extraction(M,... perform_contour_extraction - exctract the geometry of

perform_convolution(x,h, boun... perform_convolution - compute convolution with centered filter.

perform_curve_extraction(M, t... perform_curve_extraction - extract level set curves from an image.

perform_curve_resampling(c, s... perform_curve_resampling - resample a curve

perform_farthest_landmark_sam... perform_farthest_landmark_sampling - samples landmark using least error seeding strategy

perform_farthest_point_sampli... perform_farthest_point_sampling - samples points using farthest seeding strategy

perform_fast_marching(W, star... perform_fast_marching - launch the Fast Marching algorithm, in 2D or 3D.

perform_fast_marching_mesh(ve... perform_fast_marching_mesh - launch the Fast Marching algorithm on a 3D mesh.

perform_fmstar_2d(W, start_po... perform_fmstar_2d - launch the Fast Marching* algorithm.

perform_fmstar_3d(W, start_po... perform_fmstar_3d - launch the Fast Marching* algorithm in 3D.

perform_front_propagation_2d_... [D,S] = perform_front_propagation_2d_slow(W,start_points,end_points,nb_iter_max,H);

perform_geodesic_interpolatio... perform_geodesic_interpolation - interpolate function values

perform_histogram_equalizatio... perform_histogram_equalization - perform histogram equalization

perform_lloyd_mesh(vertex,fac... perform_lloyd_mesh - perform lloyd relaxation to sample point on a mesh

perform_redistancing(D, optio... perform_redistancing - redistance a function

perform_tensor_recomp(e1,e2,l... perform_tensor_recomp - create the tensor field corresponding to the given eigendecomposition.

perform_vf_normalization(v1) perform_vf_normalization - renormalize a vf.

pick_curves(mask) pick_curves - ask for the user to build a set of curves

pick_start_end_point(M, no_en... pick_start_end_point - pick start/end points for front propagation.

plot_constrained_path_planing... plot_constrained_path_planing - plot the result of the fast marching.

plot_edges(edges, vertex, col... plot_edges - plot a list of edges

plot_fast_marching_2d(W,S,pat... plot_fast_marching_2d - plot the result of the fast marching.

plot_fast_marching_3d(W,S,pat... plot_fast_marching_3d - plot the result of the fast marching.

plot_fast_marching_mesh(verte... plot_fast_marching_mesh - plot the result of the fast marching on a mesh.

plot_mesh(vertex,face,options...

plot_volumetric_data(W, nb_co... plot_volumetric_data - plot a cube of data.

prod_vf_sf(v1,s) prod_vf_sf - compute the product of a vector field by a scalar field.

progressbar(n,N,w) progressbar - display a progress bar

publish_html(filename, output... publish_html - publish a file to HTML format

read_mesh(file)

read_off(filename) read_off - read data from OFF file.

rescale(x,a,b)

triangulation2adjacency(face,... triangulation2adjacency - compute the adjacency matrix

vol3d(varargin)

batch_landmarks_error.m

batch_propagation_mesh.m

batch_shape_meshing.m

compile_mex.m

perform_front_propagation_2d.m

testFM2dAniso.m

test_active_contour.m

test_anisotropic.m

test_anisotropic_feth.m

test_anisotropic_fm.m

test_anisotropic_fm_old.m

test_bending_invariants.m

test_bug.m

test_circular.m

test_circular_fast_marching_2...

test_circular_prior.m

test_constrained_map.m

test_distance_approximation.m

test_distance_compression.m

test_eccentricity.m

test_eucldist.m

test_farthest_sampling_2d.m

test_farthest_sampling_3d.m

test_farthest_sampling_mesh.m

test_farthest_sampling_shape.m

test_fast_marching_2d.m

test_fast_marching_3d.m

test_fmstar_2d.m

test_fmstar_3d.m

test_fmstar_error.m

test_fmstar_landmark.m

test_fmstar_path_planing.m

test_fmstar_weight_2d.m

test_geodesic_interpolation.m

test_geodesic_vs_euclidean.m

test_heuristic_mesh.m

test_influence.m

test_landmark.m

test_landmark_error.m

test_multiple_paths_2d.m

test_multiple_paths_3d.m

test_path_planing.m

test_propagation_2d.m

test_propagation_mesh.m

test_propagation_shape.m

test_redistancing.m

test_segmentation.m

test_skeleton.m

test_vol3d.m

test_voronoi_segmentation.m

test_voronoi_triangulation.m

toolbox_fast_marching.m

Highlights from Toolbox Fast Marching

Highlights from
Toolbox Fast Marching