Is it possible to use an output function with sbiosimulate as with the ODE solver suite?

As per my question, I would like to be able to set up an output function to use with sbiosimulate. I couldn't find anything from my bit of online searching nor from the sbiosimulate documentation. If anyone who is more familiar with SimBiology could send an example I would appreciate it.

For some reference, I am trying to set up a code to sample a parameter space and evaluate if a given position is viable (as in doesn't fail to evaluate or take too long to solve). The latter point is where I am having my issue as I don't know how to set up a timeout function without using the method from this post: How can I set a timeout for slow executing codes?. Also, the model I am using is rather large (~40 species, 150 parameters) so I would prefer to not have to convert it for use with the ODE solver suite.

Thanks for any help or pointers you can give!

Answer 1

[Arthur Goldsipe]

Hi Kevin,

In SimBiology you can set the maximum number of seconds that a simulation should take by setting the configset property MaximumWallClock. This property is described in more detail here.

-Arthur

[Kevin Rodden]

Thanks so much for the reply Arthur; I appreciate it!

Got everything up and running now!