I have data that is in 3 subdirectories "LFP", "Pos", and "Neg". Each folder has the same number of .mat files in it, say 8 for this example. I have an analysis script that I have written that works. Now I would like to loop through all the files in each of the folders and run the analysis and save the output.
It would look something like:
savename = fullfile(char(strcat('Phase_Locking_','NS6_001','NS3_001')));
save(savename,'polarhistograms', 'pval', 'z');
Then I would loop through and do the same for Pos/times_NS6_00(2-8) and LFP/NS3.00(2-8). After this it would be the same for Neg/times_NS6_00(1-8) and LFP/NS3.00(1-8).
I need to basically test every file in the LFP folder with every file in both the "Pos" and "Neg" folders (all combinations).
Any help on what to add to my code to get this done in an efficient way would be much appreciated!