A simple BLAST algorithm
A simple BLAST algorithm based on a simple dynamic programming strategy.
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The function implements a BLAST (Basic Local Alignment Search Tool) algorithm using a simple dynamic programming strategy. A self-defined vTree class is also included, on which the "Reconstruct" process is based. The data of the tree is stored in a vector. The idea is inspired by the union-find algorithm.
Cite As
Ligong Han (2026). A simple BLAST algorithm (https://www.mathworks.com/matlabcentral/fileexchange/49003-a-simple-blast-algorithm), MATLAB Central File Exchange. Retrieved .
General Information
- Version 1.3 (9.53 KB)
MATLAB Release Compatibility
- Compatible with any release
Platform Compatibility
- Windows
- macOS
- Linux
| Version | Published | Release Notes | Action |
|---|---|---|---|
| 1.3 | - vTree class updated: fixed an error of the 'delChild' method |
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| 1.2.0.0 | - Updated vTree |
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| 1.1.0.0 | - a missing file added
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| 1.0.0.0 |
