CaImAn

Complete Matlab pipeline for large scale calcium imaging data analysis

https://github.com/flatironinstitute/CaImAn-MATLAB

Version 1.0.0.0 (35 MB)
1.9K Downloads
(5)
4 Jul 2023

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Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach (CNMF).

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Cite As

Eftychios Pnevmatikakis (2026). CaImAn (https://github.com/flatironinstitute/CaImAn-MATLAB), GitHub. Retrieved .

Acknowledgements

Inspired: Catrex GUI

Categories

Find more on Neuromicroscopy in Help Center and MATLAB Answers

General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux

Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
1.0.0.0

Added an image
Updated name and link to github repo.

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.