File Exchange

image thumbnail

qMRLab

version 2.0.1 (20.7 MB) by Agah Karakuzu
Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: Use GUI or CLI to fit and simulate a myriad of qMRI models.
5.0
1 Rating

13 Downloads

Updated 06 Mar 2021

From GitHub

View license on GitHub

An intuitive tool for data fitting, plotting, simulation and protocol optimization for a myriad of different quantitative models: T1 (IR, VFA) & T2 (MWF) Relaxometry, Magnetization Transfer (MTsat and qMT methods), Field Mapping (B1 and B0), diffusion (DTI, NODDI, CHARMED) and more!

You can read the docs,
http://qmrlab.readthedocs.io/

Use our Docker image to make qMR processing portable,
docker pull neuropoly/qmrlab
https://hub.docker.com/r/neuropoly/qmrlab/

Download sample qMRI data,
https://osf.io/tmdfu/

RRID:SCR_016256

https://www.neuro.polymtl.ca/

Cite As

Agah Karakuzu (2021). qMRLab (https://github.com/qMRLab/qMRLab), GitHub. Retrieved .

Comments and Ratings (1)

Tanguy DUVAL

MATLAB Release Compatibility
Created with R2015b
Compatible with R2014b and later releases
Platform Compatibility
Windows macOS Linux

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Deploy/Compile

Deploy/Documentation

Deploy/Documentation/NotebookGen

External/AMICO/AMICO_matlab

External/AMICO/AMICO_matlab/kernels

External/AMICO/AMICO_matlab/models

External/AMICO/AMICO_matlab/optimization

External/AMICO/AMICO_matlab/other

External/AMICO/SPAMS

External/AMICO/SPAMS/build

External/AMICO/SPAMS/src_release

External/AMICO/SPAMS/test_release

External/Faddeeva_MATLAB

External/MOcov/MOcov

External/MOcov/MOcov/@MOcovMFile

External/MOcov/MOcov/@MOcovMFileCollection

External/MOcov/MOcov/@MOcovProgressMonitor

External/MOcov/tests

External/MOxUnit/MOxUnit

External/MOxUnit/MOxUnit/@MOxUnitErroredTestOutcome

External/MOxUnit/MOxUnit/@MOxUnitFailedTestOutcome

External/MOxUnit/MOxUnit/@MOxUnitFunctionHandleTestCase

External/MOxUnit/MOxUnit/@MOxUnitMatlabUnitWrapperTestCase

External/MOxUnit/MOxUnit/@MOxUnitPassedTestOutcome

External/MOxUnit/MOxUnit/@MOxUnitSkippedTestOutcome

External/MOxUnit/MOxUnit/@MOxUnitTestCase

External/MOxUnit/MOxUnit/@MOxUnitTestNode

External/MOxUnit/MOxUnit/@MOxUnitTestOutcome

External/MOxUnit/MOxUnit/@MOxUnitTestReport

External/MOxUnit/MOxUnit/@MOxUnitTestSuite

External/MOxUnit/MOxUnit/util

External/MOxUnit/tests

External/NIfTI_20140122

External/NODDI_toolbox_v1.0/ParforProgMonv2

External/NODDI_toolbox_v1.0/fitting

External/NODDI_toolbox_v1.0/models

External/NODDI_toolbox_v1.0/models/watson

External/SOMA

External/blochSim

External/centerOfMass

External/comp_struct

External/consolidator

External/cprintf

External/crossing

External/dicm2nii

External/gencode

External/getGitInfo

External/imtool3D_td

External/imtool3D_td/External

External/imtool3D_td/External/bids-matlab/+bids

External/imtool3D_td/External/bids-matlab/+bids/+util

External/imtool3D_td/External/bids-matlab/+bids/private

External/imtool3D_td/External/dndcontrol

External/imtool3D_td/External/interpmask

External/imtool3D_td/External/mask2poly

External/imtool3D_td/External/reduce_poly

External/imtool3D_td/src

External/jsonlab-master

External/jsonlab-master/examples

External/knkutils

External/laplacianUnwrap

External/loadminc

External/mppca_denoise

External/nansuite

External/parTicToc

External/parfor_progress

External/plotregion

External/rician

External/smoothn

External/sort_nat

External/sunwrap

External/txt2mat

Test

Test/Common/pulse

Test/Common/sim

Test/Models

Test/Models_Functions/IRfun

Test/Models_Functions/SIRFSEfun

Test/Models_Functions/SPGRfun

Test/Models_Functions/SPGRfun/functions

Test/Models_Functions/bSSFPfun

Test/MoxUnitCompatible

Test/MoxUnitCompatible/BatchExamplePart2

Test/MoxUnitCompatible/BatchMatlabOnly

Test/MoxUnitCompatible/equation_test

Test/MoxUnitCompatible/other

Test/MoxUnitCompatible/quickMoxTests

Test/MoxUnitCompatible/simTests

Test/UnitTests/Model_Functions/QSM

src/Addons/SimMonteCarlo_Diffusion

src/Addons/SimMonteCarlo_Diffusion/axonpacking/code

src/Addons/SimProtocolOpt

src/Addons/SimRnd

src/Addons/SimVary

src/Addons/SingleVoxel

src/Common

src/Common/GUI

src/Common/RandPolyhedron

src/Common/blochsim

src/Common/lineshape

src/Common/pulse

src/Common/sim

src/Common/tools

src/Common/tools/FileBrowser

src/Common/tools/GUIfun

src/Models/Diffusion

src/Models/FieldMaps

src/Models/Magnetization_transfer

src/Models/Noise

src/Models/Processing

src/Models/QSM

src/Models/T1_relaxometry

src/Models/T2_relaxometry

src/Models/UnderDevelopment

src/Models_Functions/AFIfun

src/Models_Functions/AMICOfun

src/Models_Functions/CHARMEDfun

src/Models_Functions/DTIfun

src/Models_Functions/Diffusion

src/Models_Functions/Filter

src/Models_Functions/IRfun

src/Models_Functions/MP2RAGE/func

src/Models_Functions/MTSATfun

src/Models_Functions/MTVfun

src/Models_Functions/MWF

src/Models_Functions/MWF/met2_eva

src/Models_Functions/NODDIfun

src/Models_Functions/Noise

src/Models_Functions/QSM

src/Models_Functions/SIRFSEfun

src/Models_Functions/SIRFSEfun/functions

src/Models_Functions/SPGRfun

src/Models_Functions/SPGRfun/functions

src/Models_Functions/bSSFPfun

src/Models_Functions/bSSFPfun/functions

src/Models_Functions/vfa_t1

External/gencode/examples

External/rician