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Cufflinks Support Package for the Bioinformatics Toolbox

version 19.1.0 (63.4 KB) by MathWorks Bioinformatics Team
Transcriptome assembly and differential expression analysis for RNA-Seq.


Updated 21 Mar 2019

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Cufflinks is a suite of tools for gene discovery and expression analysis of high-throughput RNA sequencing (RNA-Seq) data. It allows biologists to accurately identify new genes and splice variants, merge and compare transcriptome assemblies, and detect many types of differential transcript expression.

Cite As

MathWorks Bioinformatics Team (2021). Cufflinks Support Package for the Bioinformatics Toolbox (, MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2018b
Compatible with any release
Platform Compatibility
Windows macOS Linux
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