File Exchange

DeepSqueak

Version 3.0.1 (138 MB) by Kevin R Coffey
DeepSqueak v3: Using Machine Vision to Accelerate Bioacoustics Research
5.0
(1)

824 Downloads

Updated 6 Apr 2023

From GitHub

View License on GitHub

DeepSqueak v3: Using Machine Vision to Accelerate Bioacoustics Research

Version Manuscript Help Gitter Video Twitter Follow View DeepSqueak on File Exchange

gify

V3 Major Upgrades

  • Brand New YOLO V2 based Detection Architechture
  • Navigate Entire Audio Files to Quickly & Easily Refine Detections or Add New Boxes
  • Retrain Existing Networks With Your Own Recordings
  • Start From Scratch: Hand Box Calls and Train a New Species Detector
  • Contour Invarient Clustering With Variational Auto Encoders
  • Brand New Clustering GUI

Copyright © 2021 by Ruby Marx, Kevin Coffey, Robert Ciszek, & Lara Valderrabano All Rights Reserved.

Cite As

Coffey, K.R., Marx, R.G. & Neumaier, J.F. (2019). DeepSqueak: a deep learning-based system for detection and analysis of ultrasonic vocalizations. Neuropsychopharmacology. 44, 859–868. https://doi.org/10.1038/s41386-018-0303-6

MATLAB Release Compatibility
Created with R2020a
Compatible with R2019a to R2021a
Platform Compatibility
Windows macOS Linux
Categories
Find more on Behavior and Psychophysics in Help Center and MATLAB Answers

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Functions

Functions/Call Classification

Functions/Colormaps

Functions/Import and Export

Functions/Network Training

Functions/Variational Autoencoder

Versions that use the GitHub default branch cannot be downloaded

Version Published Release Notes
3.0.1

New Image & Title
3.0.0

V3 Major Upgrades

Brand New YOLO V2 based Detection Architechture
Navigate Entire Audio Files to Quickly & Easily Refine Detections or Add New Boxes
Retrain Existing Networks With Your Own Recordings
Start From Scratch: Hand Box Call
2.6.1

Minor Bug Fixes
2.6.0

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.