CanlabCore

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis

This repository contains core tools for MRI/fMRI/PET analysis from the Cognitive and Affective Neuorscience Lab (Tor Wager, PI) and our collaborators. The tools provide a high-level language for interacting with neuroimaging data. The idea is to take preprocessed data or even the results of single-subject analyses—the output of established preprocessing pipelines—and import them into lightweight, flexible data objects specialized for neuroimaging visualization and analysis. These objects allow for interactive analysis with simple commands, like “plot”, “predict”, and “montage”. The repository also includes other useful toolboxes, including fMRI design optimization using a genetic algorithm, fMRI HRF estimation, fMRI analysis with Hierarchical Exponentially Weighted Moving Average change-point analysis, various fMRI diagnostics, and miscellaneous other tools and functions for visualizing brain data.