Hamming distance between columns of two matrices

Hii

%Just an example
HamDist = pdist2(B,C,'hamming');
[~,ind] = min(HamDist,[],2);

Is there any trick to perform hamming distance between columns of two different binary matrices: A(64 by100) and B(64 by 80), and report the minimum distances?

To understand more : the "A" is a data matrix with 100 sample, and the B has 80 cluster centroids and in terms of clustering i would like to create the indicator matrix based on the minimum distance between A and B.

[Awais Saeed]

How aboout padd some zeros in B to make size(A)=size(B) and then find the hamming distance

[riad didou]

To understand more : the "A" is a data matrix with 100 sample, and the B has 80 cluster centroids and in terms of clustering i would like to create the indicator matrix based on the minimum distance between A and B.

Answer 1

[KSSV]

HamDist = pdist2(A',B','hamming');
HamDist = HamDist' ; 
[~,ind] = min(HamDist,[],2);

[riad didou]

but the result of the first line is a real values (HamDist )!!