Asked my question again with more relevant info to avoid confusion. Sorry and thanks for the help.
I have a text file (attached) with data that is similar to data I am looking at. I can't attach the actual file due to NDA's, but the file I attached is essentially the same with different numbers, the only part I care about it the RainflowCycleCounter stuff, the temp stuff is for other applications. What I need to do is take, for example, RainflowCycleCounterHistogram[0][0]=0, and map this value, 0, to a matrix location equal to [0,0].