Graph package

Version (36.9 KB) by Kyaw Tun
Graph package for molecular biologist
Updated 6 Jun 2009

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In biology, graph formalism is prevalently used. This graph package is for you to analysis biomolecular interaction network with the comfort of MATLAB. The package includes algorithm like modularity, clustering coefficient, all-pair shortest path (amazingly fast, great if you have 64-bit) and so on. It also do plotting the graph with force directed layout. The graph can be generated from various input format as well as SBML , GML, DOT or SIF file.

The package is written as MATLAB object and furnish with rich tools for manipulating the graph object and export adjacency matrix for further analysis.

Cite As

Kyaw Tun (2024). Graph package (, MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R14
Compatible with any release
Platform Compatibility
Windows macOS Linux
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Version Published Release Notes

Add graph partitioning, some kernel methods and bug fix