Phylogenetic analysis of DNA sequences or genomes by Fourier transform

Version 1.0.0.0 (6.23 KB) by Changchuan Yin
Phylogenetic analysis of DNA sequences or genomes by Fourier transform
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Updated 12 Jul 2015

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Phylogenetic analysis of DNA sequences or whole genomes by Fourier transform: The DNA sequences or genomes are mapped into 2-dimensional (2D) numerical sequences based on
the nucleotide composition of the DNA sequences. Euclidean distances of DNA sequences of different lengths are computed after even scaling the Fourier power spectra of the DNA sequences to the longest length of the sequences.
Reference
Yin, C., & Yau, S. S. T. (2015). An improved model for whole genome phylogenetic analysis by Fourier transform. Journal of Theoretical Biology. doi:10.1016/j.jtbi.2015.06.033

Cite As

Changchuan Yin (2025). Phylogenetic analysis of DNA sequences or genomes by Fourier transform (https://www.mathworks.com/matlabcentral/fileexchange/52072-phylogenetic-analysis-of-dna-sequences-or-genomes-by-fourier-transform), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2011b
Compatible with any release
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Version Published Release Notes
1.0.0.0