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BioSigKit a toolkit for Bio-Signal analysis

version 1.0.0.2 (3.4 MB) by Hooman Sedghamiz
BioSigKit is a set of useful signal processing tools for Biosignal analysis such as QRS detectors, peak detectors and activity detection

57 Downloads

Updated 18 Oct 2018

GitHub view license on GitHub

BioSignal Analysis KitBioSigKit is a set of useful signal processing tools in Matlab that are either developed by me personally or others in different fields of biosignal processing. BioSigKit is a wrapper with a simple visual interface that gathers this tools under a simple easy to use platform.

ECG QRS detection Algorithms:

1- Pan Tompkins
2- Phase Space Construction
3- Realtime QRST
4- Multivalued Teager Energy Operator
5- Multiscale Peakdetector
6- Filter Bank

3 Channel Accelerometer:
1- Activity Detection
2- Respiratory signal reconstruction

EEG Processing:
1- Hjorth Parameters

Additional Algorithms:
1- ECG derived respiration based on realtime PCA construction
2- Real time adaptive filtering and motion reduction

SEE https://github.com/hooman650/BioSigKit for a complete list!

BioSigKit's goal is to create an open source platform and umbrella for the implementation and analysis of useful signal processing algorithms. All of it's subroutines are implemented in pure MatLab script for the educational purposes even the most popular algorithms such as (Pan-Tompkins).
The ultimate goal of BioSigKit is not to be only used for ECG processing, it aims to be helpful in analysis of several different physiological signals such as EMG, ACC and EDR as well. For instance the last subroutine which is a general peak detector can already be used in many different signals even with low frequencies (Please see the paper by Scholkmann). BioSigKit offers other subroutines for ECG-derived respiration computation, real time multi-channel and single channel Foetal ECG extraction based on non-linear filtering and neural PCA. BioSigKit also offers Psuedo-correlation template matching which has proven to be more accurate for locating MUAPs in EMG signals (EMG toolbox (offered by the same author)). Futhermore, several more subroutines enable the user to estimate the posture of the subject from 3 channel ACC recordings, as well as ACC-derived respiration estimation. Please see the cheatSheet.pdf for the list of all methods provided by BioSigKit.

Cite As

Sedghamiz, (2018). BioSigKit: A Matlab Toolbox and Interface for Analysis of BioSignals. Journal of Open Source Software, 3(30), 671, https://doi.org/10.21105/joss.00671

Comments and Ratings (5)

engin baris

>> Analysis = RunBioSigKit();
Error using event.listener
Event 'SizeChanged' is not defined for class 'uix.BoxPanel'.

Error in uix.mixin.Container (line 54)
sizeChangedListener = event.listener( ...

Error in uix.mixin.Panel (line 1)
classdef Panel < uix.mixin.Container

Error in uix.Panel (line 17)
function obj = Panel( varargin )

Error in uix.BoxPanel (line 60)
function obj = BoxPanel( varargin )

Error in BioSigKit/BioSigKitPanel (line 60)
updateOpt = uix.BoxPanel('Parent',obj.panel,'BorderType','etchedin','title',...

Error in BioSigKit (line 179)
BioSigKitPanel(obj);

Error in RunBioSigKit (line 57)
Analysis = BioSigKit();

how can i handle this error???

Koke Yao

Thanks very very much

Please follow this link for more instructions and details in regards to the toolbox and its functions:
https://github.com/hooman650/BioSigKit

Updates

1.0.0.2

Added the citation.

1.0.0.1

Added more explanation and links

1.0.0.0

-title updated

1.0.0.0

-Added profile pic

MATLAB Release Compatibility
Created with R2015b
Compatible with any release
Platform Compatibility
Windows macOS Linux