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fctSPM

version 1.1.0 (10.8 MB) by Trama Robin
Using spm1d package (v.0.4.3), compute anova and post-hoc tests from anova1 to anova3rm, with a non-parametric approach (permutation tests)

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Updated 06 Aug 2020

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Using spm1d package (v.0.4.3), compute anova and post-hoc tests from anova1 to anova3rm, with a non-parametric approach (permutation tests)
The type of anova (if required) and post-hoc are choosen regarding the independant or repeated measure effect given in parameters.
The function automatically adapts to 1D and 2D data
Examples are in ...\fctSPM\Examples
1D examples are torque ratios
2D examples are maps obtained with continuous wavelet transforms

Please visit http://spm1d.org/index.html for information
spm1d package for matlab : https://github.com/0todd0000/spm1dmatlab

please cite for spm1d : Pataky TC (2010). Generalized n-dimensional biomechanical field analysis using statistical parametric mapping. Journal of Biomechanics 43, 1976-1982.
please cite for permutation tests : Nichols TE, Holmes AP (2002). Nonparametric permutation tests for functional neuroimaging: a primer with examples. Human Brain Mapping 15(1), 1–25.

WARNINGS:

Unbalanced two- and three-way repeated-measures ANOVA results have not been verified.
Example: more subjects in Group 1 than in Group 2.
Please interpret results for these designs with caution, and recognize that they might not be valid.

Post-hoc tests with Bonferonni correction are only approximate

Effect sizes and confidence intervals are not validated

Cite As

Trama Robin (2020). fctSPM (https://github.com/tramarobin/fctSPM/releases/tag/v1.1.0), GitHub. Retrieved .

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Updates

1.1.0

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/v1.1.0

1.0.5

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/1.0.5

1.0.4

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/1.0.4

1.0.3

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/1.0.3

1.0.2

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/1.0.2

1.0.1

See release notes for this release on GitHub: https://github.com/tramarobin/fctSPM/releases/tag/1.0.1

MATLAB Release Compatibility
Created with R2019a
Compatible with any release
Platform Compatibility
Windows macOS Linux
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Examples

mainFunctions

plotFunctions

spm1d_Pataky/+spm1d

spm1d_Pataky/+spm1d/+data

spm1d_Pataky/+spm1d/+data/+mv0d/+cca

spm1d_Pataky/+spm1d/+data/+mv0d/+hotellings1

spm1d_Pataky/+spm1d/+data/+mv0d/+hotellings2

spm1d_Pataky/+spm1d/+data/+mv0d/+hotellings_paired

spm1d_Pataky/+spm1d/+data/+mv0d/+manova1

spm1d_Pataky/+spm1d/+data/+mv1d/+cca

spm1d_Pataky/+spm1d/+data/+mv1d/+hotellings2

spm1d_Pataky/+spm1d/+data/+mv1d/+hotellings_paired

spm1d_Pataky/+spm1d/+data/+mv1d/+manova1

spm1d_Pataky/+spm1d/+data/+uv0d/+anova1

spm1d_Pataky/+spm1d/+data/+uv0d/+anova1rm

spm1d_Pataky/+spm1d/+data/+uv0d/+anova2

spm1d_Pataky/+spm1d/+data/+uv0d/+anova2nested

spm1d_Pataky/+spm1d/+data/+uv0d/+anova2onerm

spm1d_Pataky/+spm1d/+data/+uv0d/+anova2rm

spm1d_Pataky/+spm1d/+data/+uv0d/+anova3

spm1d_Pataky/+spm1d/+data/+uv0d/+anova3nested

spm1d_Pataky/+spm1d/+data/+uv0d/+anova3onerm

spm1d_Pataky/+spm1d/+data/+uv0d/+anova3rm

spm1d_Pataky/+spm1d/+data/+uv0d/+anova3tworm

spm1d_Pataky/+spm1d/+data/+uv0d/+ci1

spm1d_Pataky/+spm1d/+data/+uv0d/+ci2

spm1d_Pataky/+spm1d/+data/+uv0d/+cipaired

spm1d_Pataky/+spm1d/+data/+uv0d/+normality

spm1d_Pataky/+spm1d/+data/+uv0d/+regress

spm1d_Pataky/+spm1d/+data/+uv0d/+t1

spm1d_Pataky/+spm1d/+data/+uv0d/+t2

spm1d_Pataky/+spm1d/+data/+uv0d/+tpaired

spm1d_Pataky/+spm1d/+data/+uv1d/+anova1

spm1d_Pataky/+spm1d/+data/+uv1d/+anova1rm

spm1d_Pataky/+spm1d/+data/+uv1d/+anova2

spm1d_Pataky/+spm1d/+data/+uv1d/+anova2nested

spm1d_Pataky/+spm1d/+data/+uv1d/+anova2onerm

spm1d_Pataky/+spm1d/+data/+uv1d/+anova2rm

spm1d_Pataky/+spm1d/+data/+uv1d/+anova3

spm1d_Pataky/+spm1d/+data/+uv1d/+anova3nested

spm1d_Pataky/+spm1d/+data/+uv1d/+anova3onerm

spm1d_Pataky/+spm1d/+data/+uv1d/+anova3rm

spm1d_Pataky/+spm1d/+data/+uv1d/+anova3tworm

spm1d_Pataky/+spm1d/+data/+uv1d/+regress

spm1d_Pataky/+spm1d/+data/+uv1d/+t1

spm1d_Pataky/+spm1d/+data/+uv1d/+t2

spm1d_Pataky/+spm1d/+data/+uv1d/+tpaired

spm1d_Pataky/+spm1d/+geom

spm1d_Pataky/+spm1d/+plot

spm1d_Pataky/+spm1d/+rft1d

spm1d_Pataky/+spm1d/+stats

spm1d_Pataky/+spm1d/+stats/+anova

spm1d_Pataky/+spm1d/+stats/+anova/+designs

spm1d_Pataky/+spm1d/+stats/+anova/+factors

spm1d_Pataky/+spm1d/+stats/+ci

spm1d_Pataky/+spm1d/+stats/+nonparam

spm1d_Pataky/+spm1d/+stats/+nonparam/+calculators

spm1d_Pataky/+spm1d/+stats/+nonparam/+ci

spm1d_Pataky/+spm1d/+stats/+nonparam/+metrics

spm1d_Pataky/+spm1d/+stats/+nonparam/+permuters

spm1d_Pataky/+spm1d/+stats/+nonparam/+snpm

spm1d_Pataky/+spm1d/+stats/+normality

spm1d_Pataky/+spm1d/+stats/+spm

spm1d_Pataky/+spm1d/+util

spm1d_Pataky/examples/nonparam/0d

spm1d_Pataky/examples/nonparam/1d

spm1d_Pataky/examples/normality/0d

spm1d_Pataky/examples/normality/1d

spm1d_Pataky/examples/stats0d

spm1d_Pataky/examples/stats1d

spm1d_Pataky/examples/stats1d_roi

spm1d_Pataky/examples/stats2d

spm1d_Pataky/spm8

utilityFunctions