Hessian based Frangi Vesselness filter

Enhancement of Vessel/ridge like structures in 2D/3D image using hessian eigen values

This function uses the eigenvectors of the Hessian to compute the likeliness of an image region to contain vessels or other image ridges , according to the method described by Frangi (2001)It

Adaptive Robust Numerical Differentiation

Numerical derivative of an analytically supplied function, also gradient, Jacobian & Hessian

well as the gradient vector, directional derivative, Jacobian matrix, and Hessian matrix. Error estimates are provided for all tools.DERIVEST provides a robust adaptive numerical differentiation (up to

Complex step Hessian

Calculate Hessian using complex step differentiation

Hessian is the second order derivative of a scalar function. It is relatively difficult using finite difference to get accurate Hessian due to the approximation error if the differentiation step is

Microscopy Image Browser (MIB)

MIB is a package for segmentation of multi-dimensional (2D-4D) microscopy datasets

Newton Raphson Optimization by Symbolic Math

Minimizes a target function. Derivatives are computed automatically by the software.

is highly efficient, especially for convex or semi-convex functions, but requires explicit expressions of the gradient vector and Hessian matrix. Direct calculation of these derivatives may be tedious

fminsdp

A code for solving non-linear optimization problems with matrix inequality constraints.

Symbolic Hessian Evaluator

For a symbolic input function f, returns the symbolic Hessian matrix. A real time saver imho -_-

For a symbolic input function f, returns the symbolic Hessian matrix. A real time saver imho -_-I don't know how useful anyone will find this, but eh, my professor made us do it on the test, so I

Markov_Copula_code.zip

Markov Switching Copula Model

gaussdiff

Small set of functions for doing basic differential geometry: applying Gaussian derivative filters t

error. Also checks whether the used scale (sigma) is sufficiently high for the given order of differentiation.Can be used from simple smoothing tasks to calculation of the Hessian. Support for

MIDAS Matlab Toolbox

Repack of Mi(xed) Da(ta) S(ampling) regressions (MIDAS) written by Eric Ghysels and collaborators

Compression of MoCap Data using DWT (GUI based)

Compression of Motion Capture Data (ASF/AMC format) using Discrete Wavelet Transform

gibbonCode/GIBBON

GIBBON: The Geometry and Image-Based Bioengineering add-ON for MATLAB

Teaching Numerical Gradients and Hessians

Simple, well-commented Matlab code to demonstrate how to take numerical derivatives and Hessians.

This submission is a set of m-files to demonstrate how to take a simple numerical derivative and Hessian of an arbitrary function. Each step in the code is documented. There is a test script

Image Edge Enhancing Coherence Filter Toolbox

Advanced 2D/3D noise removal and edge enhancing with anisotropic diffusion filtering ( Weickert )

, Calculate Hessian from every pixel of the Gaussian smoothed input image2, Gaussian Smooth the Hessian, and calculate its eigenvectors and values (Image edges give large eigenvalues, and the eigenvectors

ebertolazzi/mexIPOPT

Toolbox for MATLAB interfacing with IPOPT

MFE Toolbox - Kevin Sheppard

https://github.com/bashtage/mfe-toolbox

Retinal Vessel Tortuosity Analysis

This script is for calculating multiple retinal vessel tortuosity measure such as Vessel Torttousity Index (VTI)

Co-Design of an Active Automotive Suspension Using DT

A toolbox for using Direct Transcription to perform combined plant and control design.

gptoolbox

Useful functions for geometry processing, constrainted optimization and image processing.

MTT

Matlab Tensor Tools

LRSLibrary

Low-Rank and Sparse Tools for Background Modeling and Subtraction in Videos

WITio

WITio: A MATLAB data evaluation toolbox to script broader insights into big data from WITec microscopes

Optimization in MATLAB: An Introduction to Quadratic Program

Files used in "An Introduction to Quadratic Programming" Webinar

Feature Selection Library

Feature Selection Library (MATLAB Toolbox)

Multi-Objective Sequential Quandratic Programming

MOSQP is a multiobjective optimization solver for bound, linear, and nonlinear constrained problems

OpenSURF (including Image Warp)

SURF (Speeded Up Robust Features) image feature point detection / matching, as in SIFT

Neuro-Fuzzy and Soft Computing

Companion Software

Fminineq: constrained minimization

Fminineq solves constrained minimization problems, with both equality and inequality constraints.

AutoDiff_R2016b

Compute ordinary and partial derivatives of arbitrary order.

Fast Reducing of Sample Points for 1D Linear Interpolation

For a specified absolute error tolerance, reduce a 1D dataset for use with linear interpolation (interp1) in MATLAB.

Basic unconstrained optimization algorithms

A Matlab implementation for basic unconstrained optimization algorithms

Toolbox diffc

A toolbox to perform differential calculus on a matrix.

Segmentation of blood vessels in retinal fundus images using maximum principal curvature

Presented Algorithm segments blood vessels of retinal image with a high degree of accuracy

Chebfun - current version

Numerical computation with functions

jflalonde/radiometricCalibration

Radiometric calibration from a single image.

Model Predictive Control of Multi-Input, Multi-Output (MIMO) systems

Quadratic Programming is used to simulate Model Predictive Control of MIMO systems

Jerman Enhancement Filter

Enhancement of Vessel/tube and blob/sphere like structures in 2D/3D images using hessian eigenvalues

Available on GitHub.Jerman's 3D and 2D Hessian based tubular (vessel/vesselness) and spherical (blob/blobness) enhancement filters.The MATLAB code is the implementation of the next two journal

Augmented Lagrangian

The toolbox implements the Augmented Lagrangian algorithm

Lagrangian and its gradient and hessian.

slp_sqp

Sequential Linear Programming (SLP) with Trust Region (TR) and Sequential Quadratic Programming (SQP) with Line Search or TR Strategy

hessfun

Evaluates the value of the function 'fun', gradient, and hessian at a given point using forward differences.

% hessfun('fun',x) evaluates the value of the function 'fun', gradient, and% hessian at the point point x = [x1,..., xn]. This function uses forwards% differences.%% Example:% % f = @(x

matlab-delta-scoring

Matlab package implementing Delta Scoring (D -scoring method (DSM)) framewotk for test scoring, equating, and psychometric item analysis

modified_newton

This software finds an optimal solution for any smooth nonlinear function provided by users.

Hessian2Ddec

eigenvalues and eigenvectors of the Hessian of 2D matrix

Compute eigenvalues and eigenvectors of the Hessian of 2D matrix as gray images. The miniature is obtain by following code :I = mat2gray(imread('cameraman.tif'));[n, m] = size(I);idx =

Numerical Differentiation Toolbox

Functions and classes to evaluate derivatives, partial derivatives, gradients, directional derivatives, Jacobians, and Hessians.

Numerical Differentiation Toolbox This toolbox supplies functions and classes to evaluate derivatives, partial derivatives, gradients, directional derivatives, Jacobians, and Hessians using the

color image segmentation

segment color image robust to texture

hessianAnalysisDemo

Demo of how Hessian analysis can reveal a poorly scaled estimation problem

This is a demonstration of how Hessian analysis reveals that a parameter estimation problem is poorly scaled. The model investigated is nonlinear, and a local linearization is done numerically. In

mctc4bmi

Matrix and Tensor Completion for Background Model Initialization

Constitutive model of shape memory alloys

An unconstrained minimization of FEM discretized energies.

IsoMaTrix

A framework to visualize the isoclines of matrix games and quantify uncertainty in structured populations (MATLAB, Java)

Beat Synchronous Dance Animation

Beat Synchronous Dance Animation based on Analysis of Periodic Motion given the music Tempo.

Droplet Data Processing

Tools for the tracking and analysis of microfluidic droplets developed by the Yang Lab at the University of Michigan

Netlab

Pattern analysis toolbox.

Cracks segmentation by gradient and morphological methods

This repository consists of classical cracks semantic segmentation methods such as morphological, Hessian and Fractional Anisotropic Tensor.

morphological, Hessian and Multiscale Fractional Anisotropic Tensor that are widely used in medical imaging community. In this repository, these programs developed and/or improved are fine-tuned for cracks

Hessian Matrix to analyze the convexity of a Function

Hessian Matrix can be easily used to determine the convexity of a function. Which is great for optimization problems.

: 1.https://math.libretexts.org/Bookshelves/Analysis/Tasty_Bits_of_Several_Complex_Variables_(Lebl)/02%3A_Convexity_and_Pseudoconvexity/2.02%3A_Tangent_Vectors_the_Hessian_and_Convexity2. https://www.youtube.com/watch?v=F3YoC5A6Avg&ab_channel=YongWang

ParNMPC

A Parallel Optimization Toolkit for Nonlinear Model Predictive Control (NMPC)

Code Generation for Gradients and Hessians Using Symbolic AD

This package provides symbolic automatic differentiation tools for efficient code generation of gradients and Hessians.

This package contains functions for performing symbolic automatic differentiation to efficiently generate code for gradient and Hessian expressions. It relies on Matlab’s Symbolic Math Toolbox, which

INSIDDE THz Toolbox v0.2

INSIDDE THz Toolbox provides various methods for THz image analysis.

Vectorized 3D Frangi Filter

An efficient implement of 3D Frangi filter in MATLAB on both CPU and GPU

multiple scales.Computation of the Hessian matrix for each voxel in the image at each scale, followed by the computation of the three eigenvalues of the 3 x 3 Hessian matrix. These eigenvalues are then

DW-SA-cCASSCF(2,2)-2site

dynamically-weighted state-averaged constrained complete active space (2e,2o) for 2 site Anderson-Holstein model

Fast FEM evaluation of nonlinear energies: hp elements

Vectorized evaluation of nonlinear energies and their gradients using hp-FEM and application to energy minimizations.