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App Builder for SimBiology Models

version (305 KB) by Fulden Buyukozturk
Tool to automate the process of creating standalone, model-exploration apps for SimBiology model

1 Download

Updated 03 Apr 2014

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SimBiology provides an environment to build, simulate and analyze dynamic models of biological systems, such as PK/PD and systems biology models. Typically, once the computational biologist or modeler builds and characterizes the model, he/she wants to make the model available to a larger group of scientists for exploration purposes. Such a model exploration tool must be interactive, easy-to-use, and optionally standalone.
The app builder for SimBiology models simplifies and automates the steps for going from the SimBiology model to a such an interactive model exploration tool.

The submission includes 5 example (see example#.m) scripts that illustrate how to use the app builder.

Comments and Ratings (2)

Wei Lai


Hi Asawari and other SimBio'ers,

This tool will significantly improve the development process for deploying custom SimBiology "apps" to our end-users.

I've just started building a PK simulator for dosing drugs in murine xenograft studies and plan on deploying it to our in vivo scientists.


- Jeff Kearns
Computational Biologist @ Merrimack Pharmaceuticals


- Added slider for dose amount, along with ability to edit slider range
- Added See Run Info context menu to plot to see parameters values associated with a run
- Added a new input field, outputFolder

MATLAB Release Compatibility
Created with R2014a
Compatible with any release
Platform Compatibility
Windows macOS Linux
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