MRI Brain Segmentation
This case study shows how MATLAB can be used for a medical imaging problem. Given an MRI scan, first segment the brain mass from the rest of the head, then determine the brain volume. Also compare portions of gray and white matter present. This example was developed for seminars. It was also used for webinars for medical applications broadcast live on May 6, 2004.
This package includes some MATLAB code and an MRI scan series consisting of 60 DICOM images. Note that this code relies on MATLAB Central submissions from others. Detailed references to those sources are included.
Cite As
Robert Bemis (2021). MRI Brain Segmentation (https://www.mathworks.com/matlabcentral/fileexchange/4879-mri-brain-segmentation), MATLAB Central File Exchange. Retrieved .
Comments and Ratings (262)
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- Image Processing and Computer Vision > Image Processing > Image Segmentation and Analysis > Image Segmentation >
- Science, Engineering and Industry > Industries > Medical Devices > DICOM Format >
- Science, Engineering and Industry > Sciences > Neuroscience > Human Brain Mapping > MRI >
- Science, Engineering and Industry > Sciences > Physics > Medical Physics >
- Science, Engineering and Industry > Sciences > Biological and Health Sciences > Biomedical Imaging > MRI >
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Acknowledgements
Inspired by: Sliceomatic, hline and vline
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hello! I'm a student in biomedical engineering, can anyone please send the codes to " armut416@gmail.com " Thanks in advance.
Contact for code and support mycodeworklab@gmail.com
Whatsapp +91 9464894829
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Hi!, I am a Mtech Biomedical Engineer, can someone please send me this code. I need it urgently for my final thesis.
bt19m018@smail.iitm.ac.in
Hi!, I am a biomedical engineering student doing a project on mri image. Could you please send me the code you used in the video?
lee3325@purdue.edu
Thanks!
Hi, Could any one send the code
To my mail 11818476@zju.edu.cn. Thank you.
Hi, I am 5th year biomedical engineering student and I am doing my final year research on'' how to calculate the volume of gray matter and white matter from brain mri image'', So any one could you share to me source codes for this task via 0909mulex@gmail.com please, thank you.
Hi,
Can I please get this code to my mail k.wolczyk@onet.pl
it will be highly useful for my research.
Thank you !
Could any one send the code
To my mail ssiyaram0407@gmail.com
Hello,
Can I please get this code since it will be highly useful for my research.
Thank you sm . !
khoshi3@uic.edu
Zero
Hi, I'm a graduate student requiring code like this for my thesis. Could anyone send it to kmitch20@gmu.edu ? Thank you so much!
Hi, I am an intern in a lab requiring a code like this for MRI visualization. Could anyone please send me the code please to : aliamroune.upmc@gmail.com.
Can u pls send me the code to my gmail account pearlmaths97@gmail.com.
Hi, I'm a student of Universiti Teknologi Mara Kampus Jasin. Could you send me the code to my email at afiq.zulkepli@gmail.com ?
Thank you.
Hi! I'm a student, Can you please send me the code in the video? My email: lienhoa.tran99@gmail.com
Thank you
Hi! I'm a student, Can you please send me the code in the video? smgeiltas@gmail.com
Hi! I am a engineer in bioengineering, could you share me your codes? my email: tringuyenttt@gmail.com
Thanks,
Nguyen
Hi! I am a student at Lund University and have an ongoing project working on describing hippocampal sclerosis in vivo. I think the project could benefit from this. If possible, please share the code to my email: pe8408cl-s@student.lu.se
Best,
Petter C
I am biomedical engineering, working in ksa, I need code for. Dcm("cbct=To stld fo FEA
Hi, I am an intern in a lab requiring a code like this for MRI visualization. Could anyone please send me the code to eliglefkowitz@gmail.com?
Hi, I am a student studying biomedical imaging, this demo is really helpful, It will be great if you can send me the code.
I request you to please send the code at t18163@students.iitmandi.ac.in
Thanks
Hi, I am a student who studies to the brain segmentation, Could you send me the MATLAB code, please ?
if you could send the code please send to syedsajidhussain21@gmail.com
hello! I'm a student in biomedical engineering, can anyone please send the codes to cfontana@unisa.it. Thanks in advance
Hi, I am a student who studies to the brain segmentation, Could you send me the MATLAB code, please ?
if you could send the code please send to emmacharlotte012@gmail.com
Hi,
I am analysis a few MRI datasets and learning to automate its preprocessing steps in MATLAB.
it would be a great help, if you could share the code at - Ishi.tandon99@gmail.com
Hi, I am an analyst working on Neural Images and found this tutorial. Would it be possible to get your code so I can look into it?
Thank you in advance and my email is
h7song@health.ucsd.edu
Hello, I am a student. I am working on brain tumor segmentation. Could you please send me the code for my project? And I sure this will help my research work. shrihema17@gmail.com
Hi, I am a student à Université Laval in Quebec city and i'm working on medical image processing for my master degree. Can someone send me this code to help me in my research -> jean-philippe.levesque.4@ulaval.ca
Thank you :)
Hi, I am also a student, if anyone has the code, it would be highly beneficial for my research--> acha0520@uni.sydney.edu.au
Thank you so much in advanced :)
Hi I'm a student and I am working on medical image processing for a project. Can anyone send this code to nthnb98@gmail.com? Thank you!
hello! I'm a student in biomedical engineering. Can anyone please send the code to sritejrohan@gmail.com
hi I m student. I am working in medical image processing. can anyone send this code to sathu9790@gmail.com
Can anyone please send to me the segmentation code in this addresse : gilbert.robs@yandex.ru
Thank you.
Hi I'm research scholar. Can anyone send this code?
This code must be useful for me to research.
b15t2018b@edu.tottori-u.ac.jp
Thank you your help
I am research scholar. can anyone send this code it will be useful for me. email ID is sharmarahul.26dec@gmail.com
Hello :) I'm a research assistant and was looking for volumetric visualization, would you mind sending me the code?
cmhan616@utexas.edu - appreciate it.
This model is amazing. Im doing a project with the growth of gliomas in the brain and this code would be supper helpful in modeling how brain tumors affect the volume of the brain.
Could I please get the code for snelson11@hawk.iit.edu
thank you so much
can you send me the code syazmeer.sabudn07@s.unikl.edu.my
Hi, could you please send me your code? Thank you. eliane.brechbuehl@epfl.ch
Hi, I am a student of applied mathematics and I working on a medical image processing project.Could you please send me your code to my mail address
Maah44@outlook.com
I appreciate your help .
Hello, I am a student of electrical engineering and I working on a medical image processing project.Could you please send me your code to my mail address?
867243772@qq.com
thanks.
Could you send me the code so I can study the codes. thank you very much.
naroshshibumathew@gmail.com
Hey i am a biomedical student.
Can please send me the code.
kondameedimamatha@gmail.com
could you please provide me this code.
thank you.
vic.huang1973@gmail.com
Hello, I am a student of electrical engineering and I working on a medical image processing project.Could you please send me your code to my mail address?
kamalahmadiyan1376@gmail.com
thanks.
Hello, I am a student of electrical engineering. I try to use your code for my study of Image processing. So could you send me your code to my mail address??
I really need it. My mail address is B15T2018B@edu.tottori-u.ac.jp
Hello , i am student , please can you send me your code in the video?? at ahmedmaelesawy@gmail.com
Hello, I am a student of electrical engineering. I am researching a project on 3D brain printing, which needs to study the part of image segmentation. Would you like to share your code with me? lancelot_hou@outlook.com Thank you.
Hello , I am an Imaging and Nuclear Medicine research student and i am working on medical image project . could you please share the codes used in this video with me ?. triplet852002@gmail.com
Hello, I am biomedical student and I working on a medical image project. Could you please send me the code you used in your video?
daniela.95cv@gmail.com
Thanks!
Hi, many thanks for the very useful video series. Like everyone else I am also hoping to get a copy of the brainscan.m code (Email: stewart.mclennan@hotmail.co.uk).
Hopefully this is ok.
Best,
Stewart
Hi I am biomedical engineering student. Can you please share the source code of brainscan.m to mn18zf@leeds.ac.uk, I really need it for my project.
Hi I am biomedical engineering student.can you share the source code of brainscan.m on arko.arsenal@gmail.com
hi, i´m student on medical image processing. Could you share the codes on sebastianr2812@gmail.com?.
Thanks
Hi, i'm a student working on a medical images project. could you please share the codes on
bianca.datola@gmail.com
thanks so much
bianca
Hi, I am a student working on medical image processing, and I need to segment brain. Could you share the codes on fatemehbashiri2@gmail.com? I'll be thankful <3
Hi, I am a student in University of California, and I am working on medical image processing. Could you share the codes on y3wu@eng.ucsd.edu? Thank you so much!
Hi, I am a medical student working on a medical images project. Could you please share the codes on antonio.fasano89@gmail.com?
Many thanks!
Antonio
Hi, I am a bioengineering student working on a medial image processing project. Could you please send me the code (BrainScan.m) for reference?
bcjump@aol.com
Thank you!
Hi
Hi, I am also a student working on medical image processing and image segmentation projects. Could you please send me the code (BrainScan.m) for reference as well? nickchen1996@gmail.com
Thank you so much!
Hi,
The demonstration was really helpful. Could you please share the code on leonardusandy@gmail.com
Many thanks
Sandy
Could you please send me the code at legitarmada@gmail.com
Hello, i am a student and working on image segmentation project. Can you please send me the code for reference. akam.mu92@gmail.com.
Thanx a lot.
Hey could you send the code for sliceomatic function. I'm working on image processing as well and this would really benefit.
HI,could you please send the code (BrainScan.m) on francylima94@gmail.com?I'm working on a similar project:)
It would be really helpful, Thank you very much.
plz send the complete code my on my mail
saumyasingh2412@gmail.com
PLZ send the complete code on my mail
iphone1612.s@gmail.com
Best Wishes
Hello sir,
I'm working on a similar project. Since this is my first attempt to this type of project I'm in need of a sample code for reference. Please send me this code at naeemlatheef97@gmail.com.
Thank you!
Hello,
where can I view the video, or got it removed because it's outdated?
Best wishes
Hello sir,
Am working on the project similar to this. And am in need of the sample code for reference since this is my first attempt to thus type of project. Can so please send me this code at ramya050997@gmail.com.
Thank you!
sliceomatic error , tool is not there , its not working? very bad
plz send me all code bcz in this code i'm facing the errors plz send the all cods on
mohsinrao1516@gmail.com
HI,could u please send the code on sprahul.kumar@gmail.com.com
It would be really helpful, Thank you very much.
hello..im a student and its new thing for me to work on medical image..can you send the code to my email please....nderek88@gmail.com thank you very much...
Hello
I am medical student. Can you please send the code to my email
alhamiahmad@stud.uni-obuda.hu
Thank you very much.
Could you send me the code so I can study the codes. thank you very much.
senan1710@gmail.com
can you send me the code so I can study the codes. thank you very much.
mohammad.s.ahmadzadeh@gmail.com
Could u please send the code on abimishra98@gmail.com
It would be really helpful, Thank you very much.
Could you send the code to highonflying36@gmail.com
Thank you very much!
Could you please send me the code to 1551986795@qq.com
Thanks in advance!
Hi,
The demonstration was really helpful. Could you please share the code on chamoxe@hotmail.fr
Many thanks
Matthieu
Thank you for helping me learn image processing... I'm having some trouble with the code. Could you send me the code to noobprogramer@yahoo.com
Thank you again and have a nice day.
Could you please send the code to jenny22930794@gmail.com
thank you!
Could you please send me the code to nlevelset@gmail.com
Thanks in advance!
please send the code
rnaveen8991@gmail.com
I loved the video.
Kindly send me the code for the example to my email: nagawabanda@gmail.com
free.psk@gmail.com
kindly send me the code to drgururajahebbar@gmail.com
I appreciate it if you send me the code to mehakaggarwal106@roocketmail.com
I appreciate it if you send me the code to yairgold@yahoo.com, thanks and all the best.
appreciate it if you send me the code npq988@my.utsa.edu or cjacobcaldera@gmail.com
I appreciate if you send me the code at mahsa.tajdari91@gmail.com
greetings, appreciate to send me the code at mexicanthugz@gmail.com. currently an undergrad student segmenting brain mri
I appreciate if you send me the code.--shengywu58@gmail.com
Hello please send me the code to my email please.
amalsnair34@gmail.com
Hello
Please send me the code to my email please.
sheetalwadhai05@gmail.com
Hello ... I appreciate a lot your demonstration.... Would you please send me the code to fkifra@gmail.com
hello, send me code to email, please
thanks
leninr.panip@ucuenca.edu.ec
Hello
Send me code to email please
Thanks
usamabuz@gmail.com
Please help!!!!!
adsqz12@naver.com
shivanichinni1997@gmail.com
Hello! your video was very helpful! I want to make a project, can you please send the hole code of BrainScan.m?: stam_v@yahoo.gr
Thank you in advance
Hi,
The demonstration was really helpful. Could you please share the code on 517207@swansea.ac.uk
Many thanks
Akash
Hello everyone!
How to select one image on montage and choose between the multiple images to select, please?It's my problem now!
Please send me the code to my email please. Thanks.
friedman.maharilaza@gmail.com
Hello
Please send me the code to my email please. Thanks.
javaid.ciit@gmail.com
hey there hello
Is there anyone that can help for mr brain extraction for tumor with watershed algorthm segmentation in matlab please
Hi there, Can you please send me the code for my research references. Your cooperation is highly appreciated. You can send the example through my email. abganaqi2@gmail.com
Hi... it´s a helluva tool. Can you please send me the code? Thank you very much.
ewerton.ene@gmail.com
Please send me the code to my email please. Thanks.
naeemlatheef619@gmail.com
Hello, is there a way to download the .m files? Thanks
this is very helpful please send be code to my email
14ect34@gmail.com
thanku very much
Hello
I am medical student. Can you please send the code to my email?
trevoriu2582@yonsei.ac.kr
Thank you very much.
Hi
Can you please sende the code to my email. It will be very helpful or my project
talgold9@gmail.com
Thanks alot
could you please provide me this code.
thank you.
mahdi.abdulle@ogr.sakarya.edu.tr
Hi! It would be really helpful for my project if you could email me the code for reference : sruthisrinivasan94@gmail.com .
Thanks !
Please Could you mail me the MATLAB code for brain segmentation using MRI image to pthas88@gmail.com
Hello i am student need to have coding for my assignment. Please email to me at muhdharithmohdjohan@gmail.com.
Could you please provide me with the code?
fwteinhzosimidou@gmail.com
Could you please provide me with the code?
umisraa20@gmail.com
Great video but would I please be able to get the code? I am a PhD student in Australia. jasvir.bahl@gmail.com
Great video but would I please be able to get the code? I am a PhD student in Australia
just running the project in matlab will be enough to get pass with project ?everyone ?
hi sir,iam graduate of the department of ECE at RGUKT nuzvid, i want to do project based on brain tumour segementation using MRI images .so i want code for that .will u plz send it to my mail.i will be thankfull to u sir
Hi sir，I am a graduate of the Department of Mathematics at Shanghai University ，I am learning medical image segmentation using Matlab. could you please send me your code my e-mail is Xs_222222@shu.edu.cn
Hi. Would it be possible to get the code you used in the video? I'm working on a project at BU that uses similar analysis of large series of medical images. Thanks.
ajma@bu.edu
I would like too much to receive the code you use in the video. I want to use it for teaching purposes in Biomedical Engineering and of course the citations and aknowledgmnts to you all the time will be provided. villagran.e@gmail.com
Hello, currently studying this video as a part of a research project, Could you please send me the code you used in your video?
happymingyang@gmail.com
Thanks!
Hello, Looking into MRI as part of a PhD project. Could you please send me your code from the video. e.fullerton@lboro.ac.uk
Kind Regards
Elliott
could you please send me your code my e-mail is iabdelhamid3@gmail.com
Hello,
I downloaded code but it is not working. I had error code this :
Error using imview (line 7)
Function IMVIEW has been removed. Use IMTOOL instead.
Error in analyze_series8 (line 47)
imview(im,[0 max_level])
I need help you. Thank you more much!
My email id is:971183504@qq.com
Hi sir, this case seems useful to me, it will be great if you could share the code with me s66zhu@uwaterloo.ca . Much appreciated!
Hi, I am learning medical image segmentation using Matlab. Can you please send the package of the project. My email is: ssaripalle@gmail.com
Thanks
Sri
Hi, I'm a computer science master student at Northeastern University. Could you please send me the package of the project? My email is kong.zhe@husky.neu.edu Thank you very much
Hi, I'm a biomedical engineering student at The Catholic University of America and I'm working on a project to analyze the gray versus white matter. could you please email me codes or advice to 83nelson@cua.edu
Thank you!
Hi, I'm a computer science student of the 'University of Salerno and I'm writing a thesis on the MRI images. Could you please send me the whole package of the project?
Thank you!
email: valentelorenzo@live.it
Hello,
I'm trying to estimate ventricle volume in the brain using matlab. Can you please email me codes and any advice you may have @ ckrahimi18@gmail.com
Thank You
Hi Sir, can you email me the code for my project reference? Email to reham.targam@gmail.com
need coding on image segmentation and morphological operators on brain tumor images
yash.hajare29@gmail.com
How to extract tumor after fuzzy c-mean segmentation applied on MRI brain images
if it is possible could you please send me your code my e-mail is : wemx50029@yahoo.com.tw
if it si possible could you please send me your code my e-mail is : eliftugbaakcay@gmail.com
I want to remove skull from brain using morphological operations and thresholding.. i have wrote the following code ,but i didn't get skull stripped MRI..Please guide me..
clear all; clc [filename pathname] = uigetfile({'*.jpg';'*.bmp'},'Select MRI'); inputimage=strcat(pathname, filename); I = imread(inputimage);
figure,imshow(I), title('input');
se = strel('disk',7);
closeBW = imclose(I,se); figure, imshow(closeBW);title('close operation');
afterOpening = imopen(closeBW,se); figure, imshow(afterOpening,[]);title('open operation');
J=I-afterOpening; figure, imshow(J,[]);title('Skull of MRI');
K=I-J; figure, imshow(K,[]);title('Skull removed MRI');
could you please provide me this code.
thank you.
govind.sai62@gmail.com
Hello,
Would it be possible to send the coding to my email: zcqsjxi@ucl.ac.uk
Thank you!
need coding on image segmentation
Email: thanhhai7486@gmail.com
Thanks very much
need coding on image segmentation
could you mail me the code for the same.
arjungopinath310@gmail.com
sir, iam a PG student doing project on the mri brain white matter segmentation.Will you please help me to get the database for the same . My mail id is shabazkhanbme15@gmail.com
Hello, I am not sure how this comment section works, but could you send me this code about segmentation? Thank you in advance.
hortega@fisica.edu.uy
Hi, Could you please email the code for the same? Thanks!
email id: jashbhayani18@gmail.com
Hi, Could you please email the for the same? Thanks!
email id: jashbhayani18@gmail.com
hello sir , can you email me the code at
tranthaison226@gmail.com ?
I need it to make segmentation for the brain image
it very imp so please send the code
thank you very much!!
hello sir , can you email me the code at
lsy920607@naver.com ?
I need it to make segmentation for the brain image
it very imp so please send the code
thank you very much!!
Hello, I need this code for my project.
Can you send me this code about MRI Brain segment?
Please send email me.
My email is newspg93@gmail.com
Thank you.
Could you please share the codes for this topic ??Thanks in advance
Mail id : bsubramaniam11@gmail.com
In Medical Image Processing with MATLAB
Can you send me his code in that lecture?
please I need it..
My email is ksj9108@naver.com
thank you
can any one send me the algorithm for 3d reconstruction from segmented mri 2d slices in matlab????
My email is yameng.liu@duke.edu
Hello I am a graduate student working on medical image segmentation. Can you share me the codes?
Thanks
Hello,
I downloaded code but it is not working. I had error code this :
Error using imview (line 7)
Function IMVIEW has been removed. Use IMTOOL instead.
Error in analyze_series8 (line 47)
imview(im,[0 max_level])
I need help you. Thank you very much!
email :fatmademirezen@gmail.com
hello sir,
i am a pg student working in image processing, i am working on MRI brain image segmentation. can u share me the codes. as the downloaded code is not working.
mail id: reshma.hiralal@hotmail.com
Hello,
Can you email me the code at wuwenjun1995@gmail.com?
Thank you very much!
hello sir , can you email me the code at
masusm89@hotmail.com
I need it to make segmentation for the brain image
thank you very much
Hi Sir, can you email me the code for my project reference? Email to hslim013@unisim.edu.sg
Thanks
can you please provide me the code for my study project? my email id: saritha.saladi3188@gmail.com
Will you please send me the code for study purpose?
My email is write2adnanalamkhan(at the rate)gmail.com
can you send the code to me please? fateennad94@gmail.com
can you sens the codes to me, i need to do brain segmentation for alzheimer disease
can you send me the code please ? aalishan0806425@gmail.com
Could you send me the code please?
it very imp so please send the code
sheetalwadhai05@gmail.com
Could you send me the code please?
mrungta13@gmail.com
Thanks!
Can I get the codes please?
Thanks!
could you send me the code please ?
shaheenkanwal1995@gmail,com
Thanks :)
Can I get the codes please?
Thanks!
I would like to do something similar, except with a knee MRI, very fascinated by this could you please send me it at maria.kline@yahoo.com
i wont to segmentation of whitematter and gray matter
my project is brain MRI segmentation and 3D reconstruction ...
can you please send to me segmentation code in this address zameerabbas72@gmail.com
sr i have a problem:?? Error using ==> lt
Matrix dimensions must agree.
Error in ==> brainscan2 at 116
mriBrainPartition=(mriAdjust < level & mriAdjust>= 0)==2;%2=graymatter
>>
my project is brain tumor detection.
Can you please send to me the segmentation code in this addresse :
mimazebouchi@gmail.com
could you please help me on tumor extraction and area calculation?
sheenasandie1794@gmail.com
Thnak you Sir for the nice work !
my project is brain tumor detection.
Can you please send to me the segmentation code in this addresse : merve.acar@atauni.edu.tr
thnak you in advance !
Regards
It's OK the problem is fixed. After mading modification described on
http://www.mathworks.com/matlabcentral/fileexchange/764-sliceomatic#comments
I restart the matlab and it 's working.
I am using matlab on Linux.
Could you help me to fix this problem:
Reference to non-existent field 'toolbar'.
Even after trying the fix described on 'http://www.mathworks.com/matlabcentral/fileexchange/764-sliceomatic'
Traceback of error:
Error in figmenus>OverrideStickyUserPreferences (line 449)
set(d.toolbar,'visible',prefs.anntoolbar_Checked)
Error in figmenus (line 105)
d = OverrideStickyUserPreferences(d);
Error in sliceomaticfigure (line 136)
d = figmenus(d);
Error in sliceomatic (line 203)
d = sliceomaticfigure(d);
Error in analyze_series8 (line 68)
sliceomatic(double(D))
By 'Justas Bezaras'
Hi..
I got these errors while running the sample
Error in ==> imtool at 173
if ~internal.images.isFigureAvailable()
??? Output argument "hout" (and maybe others) not assigned during call to
"C:\Users\nethma\Desktop\MATLAB\R2011a\toolbox\images\imuitools\imtool.m>imtool".
Error in ==> imview at 18
hh = imtool(varargin{:});
Error in ==> analyze_series8 at 55
imview close all
Please Help me, HOW TO RESOLVE THIS ERROR??
I am using .dcm files of 512x512 size, i am getting an error
voxel_size =
0.4492 0.4492 5.0000
Name Size Bytes Class Attributes
D 512x512x2 1048576 uint16
Index exceeds matrix dimensions.
Error in analyze_series8 (line 49)
im = squeeze(D(:,:,i));
PLEASE HELP ME, how to resolve this error
To fix the error:
Undefined function 'vline' for input arguments of type 'double'.
Error in thresh_tool (line 90)
h_lev = vline(my_level,'-');
Get the function vline from:
http://www.mathworks.com/matlabcentral/fileexchange/1039-hline-and-vline
To fix the error
Error using imview (line 8)
Function IMVIEW has been removed. Use IMTOOL instead.
Error in analyze_series8 (line 47)
imview(im,[0 max_level])
change the instances of imview to imtool in analyze_series8.
Help me solve this error...
Undefined function 'vline' for input arguments of type 'double'.
Error in thresh_tool (line 90)
h_lev = vline(my_level,'-');
great tools, it's based on old version of Matlab. have to make a little change to run on version2012
hi, i am using matlab R2012b and they have the error:
Error using imview (line 8)
Function IMVIEW has been removed. Use IMTOOL instead.
Error in analyze_series8 (line 47)
imview(im,[0 max_level])
How to fix it? thanks
Hello, I am student learning medical image processing by applying matlab. When I use the function "threshold_tool' in this folder. It shows function 'vline' not defined. Is there any way can solve this problem. Thank you so much.
Sir,I am searching for segmentation of gray matter from T1 weigheted brain MR images.Can u plz send me the code to this address.
My id:shruti.gubbi77@gmail.com
Sir, pls give me the matlab code for whitematter sementation from mr images my mail id is :adish321309@gmail.com
Sir,I am searching for segmenting white matter from a T2 weighted brain MRI scan. But I could not get the correct tutorial to follow it. Please suggest me an algorithm that works better and accurately to segment the gray matter alone from the T2 wieghted MRI scan image my mail id is:adish321309@gmail.com
Sir i'm a student and my project is mild brain injury detection
Can you please send to me the segmentation code in this addresse : adish321309@gmail.com
sir, iam a PG student doing project on the mild brain injury detection.Will you please help me to get the database(t2 weighted mri of mild brain injured images) for the same . My mail id is adish321309@gmail.com
Hello Sir, I am PhD student of National Taipei University of Technology. i doing a project in dementia with MRI brain images using freesurfer and Matlab software. can you please tell me how to run new subject of images in Matlab. thank you! My email id is: avichandra0420@gmail.com
sir, iam a PG student doing project on the mri brain tumor segmentation.Will you please help me to get the database(mri tumor brain dicom images) for the same . My mail id is majidshokri_boj@yahoo.com
Thnak you Sir for the nice work !
Please i'm a student and my project is brain tumor detection.
Can you please send to me the segmentation code in this addresse : redouan_lahmyed@live.fr
thnak you in advance !
Regards
sir, iam a PG student doing project on the mri brain tumor segmentation.Will you please help me to get the database(mri tumor brain dicom images) for the same . My mail id is jasaem.21@gmail.com
If you want to download this useful package, click on download submission button, http://www.mathworks.com/matlabcentral/fx_files/4879/6/MRI_Brain_Scan.zip
how to download this package..
please help me...
Can you please help me how to download this file
its very use ful ,,,.
I couldn't able to download the code. please can any one help me?
I'm new to matlab, doing segmentation of brain tumor from 2D MRI images for my project. anyone have the coding? can help me?thx very much..
Really good work sir. It would be nice if you add some description to the code.
It helps me a lot
dear All, would you please guide me how I can 1/8 of volume image I mean I can reconstruct the volume image but I do not know how to extract for example 90 degree volume slice of it. I appreciate your help
good work sir. iam a PG student doing project on the same. I dont know how to split white matter from a brain MRI image using matlab.Will you please help me. My mail id is dharsiniece@gmail.com
high to all........actually i am beginner in image segmentation could anybody help me
my email id is manoj4736@gmail.com
thanks
it helps me in senior project :)
it's very good tutorial. Very good coding for matlap brain image processing.
but can you help how to segmenting brain white matter, gray matter and cerebrospinal fluid. if you have algoritm or code in matlab, help give me.
i really need....
Note for users who get stuck by the IMVIEW error. That function was replaced by IMTOOL (years ago). In analyze_series8.m just replace all occurrences of "imview" with "imtool" (and save).
See also
>> doc imview
i am getting the error in imtool and not able to remove even downloading the patch as advised. please help.
your work is good. it is helping me a lot. but i am facing a small problem if i give input(dcm files) of larger size like 138 kb other than that you used is 129 kb. please help me out with this. i am using matlab r2008a. i get the error;
voxel_size =
0.9375 0.9375 6.0000
Name Size Bytes Class Attributes
D 256x256x12 1572864 uint16
??? Index exceeds matrix dimensions.
Error in ==> analyze_series8 at 43
im = squeeze(D(:,:,i));
after the dicom files stored are read.
Make it more explanatory. so that it could be efficient for a beginner.
i wanted a code for segmentation of brain tumor from 2D MRI images.
getting the following error in R2007
??? Output argument "hout" (and maybe others) not assigned during call to "C:\Program Files\MATLAB\R2007a\toolbox\images\imuitools\imtool.m (imtool)".
Error in ==> imtool at 155
close_all = nargin == 2 && ischar(varargin{1}) && ischar(varargin{2}) && ...
Error in ==> imview at 18
hh = imtool(varargin{:});
Error in ==> analyze_series8 at 53
imview close all
me sirve para el trabajo de grado
Excellent code
Very good coding for matlap brain image processing
Good tutorial.
matlab codeing on brain image segmentation
very good!
Excellent presentation as an introductory talk for those who start MRI analysis with MATLAB.
Thank you very much!
no
help ful for the study of MRI
I am in search for xray enhancement
It's helpful for my study in medical imaging. I've not been kowning that MATLAB could also deal with the DICOM files.
program with Matlab software for leaf classification & image segmentation
thanks alot
ww
good ,i like it
it can help the students interested in the image processing.