Region Growing

Segmentation by growing a region from seed point using intensity mean measure

Simple but effective example of "Region Growing" from a single seed point.The region is iteratively grown by comparing all unallocated neighbouring pixels to the region. The difference between a

RegGrow

Region growing algorithm (supports 2D, 3D, and ND)

This function implements a region growing algorithm for 2D, 3D and ND.In short this means that this function looks at all the pixels/voxels surrounding the segmented region and adds those that have a

Microscopy Image Browser (MIB)

MIB is a package for segmentation of multi-dimensional (2D-4D) microscopy datasets

Region Growing (2D/3D grayscale)

Recursive region growing algorithm for 2D/3D grayscale images with polygon and binary mask output

A recursive region growing algorithm for 2D and 3D grayscale image sets with polygon and binary mask output. The main purpose of this function lies on clean and highly documented code.Usage:[P, J] =

Stereo testbed v0.1

Testbed for analysis, evaluation and comparison of stereo matching algorithm.

Simple single-seeded region growing

Segmentation by growing a region from user defined seed point, using intensity mean measure.

Simple and efficient (only one loop) example of "Region Growing" algorithm from a single seed point.The region is iteratively grown by comparing all unallocated neighbouring pixels to the region

color image segmentation

segment color image robust to texture

An implementation of [1], it works in follows:1. Compute the Jmap.2. Compute the valleys of Jmap.3. Valleys growing as the oversegmentation.4. Region merging.Example usage:%labels =

neuropoly/axonseg

AxonSeg is a GUI that performs axon and myelin segmentation on histology images.

Region Based Stereo Matching Algorithms

Disparity map generation by region based stereo algorithms

the Readme.txt file to see how to run codes.Citation:Alagoz, B. B. (2008). Obtaining depth maps from color images by region based stereo matching algorithms. arXiv preprint arXiv:0812.1340.

thomaskuestner/MoCoGUI

An MR Motion Correction toolbox for registration and evaluation

Clinic heart disease system

RNA toolbox to extract parameters from radionuclide angiography (RNA) images.

- Chenvese: Implemented by Yue Wu2- regionGrowing: written by Daniel Kellner, 20113- regiongrowingX: written by D. Kroon, University of Twente4- ApEn_slow: written by Amir Omidvarnia, PhD5- MyHistogram

GIFT

Group ICA/IVA software (MATLAB)

Intensity inhomogeneity correction

LEMS method to correct for intensity inhomogeneity of MR images

Microvessel Segmentation, analysis in Immunohistochemistry slices

Automatic segmentation and morphological analysis of microvessels in histological tumour sections

An automatic algorithm for the segmentation and morphological analysis of microvessels in immunostained histological tumour sections.regionGrowingCells is a matlab programme that loads images that

Region Growing (2D/3D) in C

C implementation of a basic region growing algorithm for images and volumes

A simple image segmentation method. The segmented region grows from aseed point by comparing neighbor pixels/voxels.If a neighbor pixel/voxel is smaller then the specified threshold value it becomes

JSEG - Unsupervised Segmentation of Color-Texture Regions in Images

JSEG - Unsupervised Segmentation of Color-Texture Regions in Images

criterion to local windows in the class-map results in the “Jimage,”in which high and low values correspond to possible boundaries and interiors of colortextureregions. A region growing method is then used to

Region Growing - Segmentation

Segmentation code based on region growing algorithm

This code segments a region based on the value of the pixel selected (the seed) and on which thresholding region it belongs. Based on the region growing algorithm considering four neighboring pixels.

PAREIDOLIA

A Toolbox and GUI for pointcloud processing

GIBOC-Knee-Coordinate-System for Tibia Femur & Patella

Automatic creation of anatomical coordinate system on the knee bones (Femur, Patella and Tibia)

Edge Detection and Segmentation

Edge Detection Prewitt Roberts Log Canny Sobel Straight Line Hough Transform quadree region growing

Edge Detection Prewitt Roberts Log Canny Sobel Straight Line Hough Transform quadree region growing threshold watershed

bwgrowregions: Multi-class region growing for binary images

aka Geodesic Voronoi. Useful for centerline- or skeleton-based image segmentation.

# *bwgrowregions*: Multi-class region growing for binary images[](https://github.com/WD40andTape/bwgrowregions)[![View on File

image segmentation

using region growing

image segmentation by region growing method

Mesh voxelisation

Voxelise a triangular-polygon mesh.

Plot 2D/3D region

The program plots convex linear closed regions in 2D/3D.

The program plots convex linear closed regions in 2D/3D. The region is a subset of R2 or R3 such that Ax>=b and lb<=x<=ub. It is also possible to plot points in the same plot.(See help

Growing a Compiler

Bootstrap compilers starting from a tiny compiler-compiler.

Color-Image-Segmentation-Using-Region-Growing-and-Region-Mer

Unsupervised color image segmentation using Region Growing and Region Merging

This project is reimplementation of research on color image segmentataion using region growing and region merging respectively. We prepared a demo code that you can load flower image and see 4

Finger region localisation

Localisation of the finger region using a simple mask filter method.

return the location of these edges and will return a binary mask indicating the finger region.Note that the implementation assumes that the upper edge is located in the top-half of the image and that the

Unsupervised Learning with Growing Neural Gas (GNG) Neural Network

Learns data clusters and their topology in n-dimensional space by using the Growing Neural Gas net.

The Growing Neural Gas (GNG) Neural Network belongs to the class of Topology Representing Networks (TRN's). It can learn supervised and unsupervised. Here, the on-line, unsupervised learning mode is

plotboxpos

Returns the position of a plotted axis region

plotboxpos.m: Plot box (visible) positionAuthor: Kelly KearneyThis repository includes the code for the plotboxpos.m Matlab function.This function returns the position of the plotted region of an

Neural Gas and Growing Neural Gas Networks

MATLAB implemenattion of Neural Gas and Growing Neural Gas for Clustering and Topology Learning

Fast Continuous Max-Flow Algorithm to 2D/3D Multi-Region Image Segmentation

It implements the fast continuous max-flow algorithm to 2D/3D multi-region image segmentation.

This software implements the fast continuous max-flow algorithm to 2D/3D multi-region image segmentation (Potts model). It provides three implementations: matlab, C and GPU (cuda based). All the

raacampbell/shadedErrorBar

Creates an attractive shaded error region rather than discrete bars.

shadedErrorBar shadedErrorBar is a MATLAB function that creates a continuous shaded error region around a line rather than discrete bars.The error region can either be specified explicitly or

Region of interest Extraction by free hand method

ROI_extract.m

Run the code (ROI_extract) in Matlab, and chose your image which you want to extract a region of interest from it, and select the ROI you will get it easily.

Lynx MATLAB Toolbox

A toolbox for the design of complex machine learning experiments

brainSurfer

MATLAB toolbox for visualizing brain data on surfaces.

feature of the datacursor is the ability to see what ROI within an atlas intersects with a datatip. If you have an atlas loaded with labels, the datacursor box tells you the name of the region in the atlas

Nonlinear Diffusion Toolbox

Set of functions to perform nonlinear diffusion on images.

Image segmentation using statistical region merging

Very simple and fast image segmentation code using statistical region merging.

From the paper : Nock, Richard and Nielsen, Frank 2004. Statistical Region Merging. IEEE Trans. Pattern Anal. Mach. Intell. 26, 11 (Nov. 2004), 1452-1458. It uses an a disjoint-sets data structure

siibralab

Matlab interface to the siibra toolsuite

connected data resources is constantly growing, and includes measures of cellular and molecular architecture, parcellation-based connectivity, and microscopy image resources hosted on cloud resources

geoimread

Reads a sub region of a geotiff or geojp2 image.

GEOIMREAD reads a sub region of a geotiff or geojp2 image. % Syntax A = geoimread(filename) A = geoimread(filename,xlim,ylim) A = geoimread(filename,latlim,lonlim) A = geoimread(...,buffer

Real time frame analysis - for Andor cameras

Recording software for Andor cameras with the possibility of implementing analysis in real time

Terrain Elevation

Downloads US terrain elevation from the USGS in 1/3rd arc-second resolution.

arc-seconds).yellowstoneElevData = region.readelevation([44.255813, 44.649888], [-110.861772, -110.183366], 'sampleFactor', 5, 'display', true);% Graph the elevation data for Yellowstone, using latitude and longitude% for the x and

Graph_Signal_Processing

Signal Processing on non-euclidien domain signals

FEM19

Finite element library for solving plane elasticity problems

ORACM: Online region-based active contour model

A new online region-based active contour model (ORACM) is proposed in this paper.

A new online region-based active contour model (ORACM) is presented.The computational cost of ORACM is 3.75 times less than the traditional active contour models.ORACM suitable for real-time image

Convert Voronoi cells to region mask

Convert Voronoi cells to region mask

Chebfun V4 - old version; please download current version instead

Numerical computation with functions

RegionCovarianceDescriptor.zip

Pure Matlab implementation of Region Covariance Descriptors

Pure Matlab implementation of Region Covariance Descriptors a described in "Region Covariance: A Fast Descriptor for Detection and Classification" by Oncel Tuzel, Fatih Porikli, and Peter Meer.

Petri Nets Building Blocks Library

Petri Nets Building Blocks Library for the construction of net models with ease in Simulink models

Satellite Orbit Computation

Modified SGP4 code for GPS interface

Beacon Satellite Propagation Simulation

Simulate satellite beacon signal propagation

The HDR Toolbox

The HDR Toolbox is a toolbox for processing High Dynamic Range (HDR) content.

Color segmentation by Delta E color difference

User draws region and this finds pixels in the image with a similar color, using Delta E.

Demo to perform very, very simple color detection in LAB color space. The RGB image is converted to LAB color space and then the user draws some freehand-drawn irregularly shaped region to identify a

geoscience-community-codes/GISMO

GISMO - a framework for scientific research in seismology/infrasound

fordanic/openslide-matlab

A MATLAB library for reading whole-slide images.

2D FDTD of a region with Perfect Electric Conductor boundary

2D FDTD of a region with Perfect Electric Conductor boundary condition

Map s-plane to z-plane

szmap plots all available -digital system- poles that meats all the requirements in S and Z planes

2D FDTD of a region with Perfectly Matched Layer boundary

2D FDTD of a region with Perfectly Matched Layer (PML) boundary condition

Randomforest Example

create dataset, grow trees, classifying data and visualization

dataset by using a spiral function3. rt1.m --main script for growing the forest4. branch.m --class of each branch of a tree for growing a tree5. sbranch.m --class of each branch with smaller size of memory

Kilobot Swarm Control using Matlab + Arduino

Controls swarm of kilobots to push object through maze. Swarm attracted to brightest light

planning uses value iteration for the object and potential fields for the swarm to interact with the object.REQUIRES RegionCode.m, MDPgridworldFunction.m and Arduino drivers

Region Adjacency Graph (RAG)

Computes the graph of adjacent regions in a labeled image

Computes region adjacency graph of a labeled 2D or 3D image. Two regions are considered as neighbor if they are separated by a small number of pixel in the horizontal or vertical direction, as well